CDS

Accession Number TCMCG049C10041
gbkey CDS
Protein Id XP_034896775.1
Location complement(join(1071072..1071152,1071256..1071371,1071831..1071854,1071933..1071964,1072536..1072621,1072718..1072771,1074403..1074464,1074557..1074618,1074893..1074979,1075072..1075148,1075723..1075781,1075891..1075955,1076068..1076157,1076262..1076358,1076727..1076826,1076919..1076992,1078118..1078199,1078290..1078340,1078593..1078670,1079511..1079555,1079657..1079758,1080540..1080596,1081320..1081377,1081466..1081497,1081600..1081627,1081696..1081797,1081938..1082092,1083059..1083122,1083657..1083885,1084139..1084233,1084659..1084690,1085146..1085181))
Gene LOC118035350
GeneID 118035350
Organism Populus alba

Protein

Length 803aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA638679
db_source XM_035040884.1
Definition DNA mismatch repair protein MSH5 isoform X4 [Populus alba]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAATAGACGAAACGGAAGCCCAACCTCAGGTCTATATGGCGTGCTTCCTACATGGCCATCGGGTTGGGATTTCTTACTATGATTCCAGTATTCGCCAACTGCATGTGCTTGAAGTTTGGGAAGATGGAAGTTCAGACTTCCCCCTAATTGATCTGGTAAAATATCAGGCGAAGCCTTTGACTATTTACACAAGCACTAAAAGTGAAGAGTCCTTCTTATCTGCTTTACAACGAAGTGGTACTCTGCTCTTTACCTGTTTGACTTATGAGCTAATATACATGTGGAATGTGTTTAAGCTTCAAAGTGATACAGATGGCACAACTGAGGCTCCTACGGTGAAACTCGTAAAAAGTTCAATATTCAGCTATGAGCAAGCCTGGCACAGATTGATTTACCTTCGAGTGACAGGAATGGATGATGGGCTAAATATCAAGGAGAGGGTTTCTTATCTGAGTTCCATGATGGACATAGGAAGTGATGTTCAGGTTCGAGCAAGTGGGGGTCTTCTGGCCATATTAGAAAGCGAAAGGATTGTAGATACCCTTGAGCAAAAGGAATATGGAAATGCATCAATTACTATCGATTCTGTTGTGGAAATTTCACTAAACAAATTTCTTAAACTTGATGCAGCAGCTCATGAAGCATTGCAGATTTTTCAAATCGACAAACATCCAAGCCATATGGGCATTGGCAGGGCAAAAGAAGGGTTCTCTGTGTTTGGCATGATGAATAAGTGTGTGACGCCCATTGGTAAACTTCTTCTGAGAAACTGGTTCCTGAGGCCTTTGCTGGATGTGGAAAATTTGAATGGTCGACTCGATGCTAAGTTCGACTCACCAAGCTCCCTGTCTACTGTTGGTGACTGGACAGCCTTTCTGAAGAGTGTTTGTGCGCTCTTGCATTTGGGAAAGATATTTGAAGTAGGAATTTCTGAAAATCTTCAAGAGCATGCTAAGTACTTAAATCTGAACATTGTTGAACAGGCTTGTTCATGCATCACAACAGAGCTGGCTTATGTCTATGAATTGGTGATTGGTGTTATTGATGTTAATAGAAGTAAAGAGAAGGGTTACGGGACAATAGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTTAGGCAAATCTATGAAGAACTTCCAGATTTTCTGCACAAGGTTACTTTATTGGAGCTTGCACAACTACCCCATTTGGGTAAAGAGAAGCTCGTTCCTTGTATTGTTTACATACATCAAATAGGGTACTTGCTGTGTATTTTTGAAGAGAAGCTTGAAGAAACCTCACTATTGAAGCCTCAAGATTTTGAATTTATGTTTTCTGATGTTGATGGAGAGACTAAAAGATATTTCTATCGTACCCCAAAGACAAGAGAATTGGATGAACTTCTGGGAGACATTTATCACAAGATACTTGATATGGAAAGGGCAATCACTAGGGACTTGGTTTCTCATGTGCTTCTCTTTTCTGACCATCTGCTTAAGGCTATAAATTTTGCGGCTGAACTTGATTGCATTTTGTCACTGGCCATAGTTGCTCATCAAAACAATTACGTGAGGCCTATTTTGACTGAAGAAACCTTGCTTGACATTCAAAATGGAAGGCATGTTTTGCAGGAAATGACAGTAGACACATTTATTCCTAATGATACAAAGATTCTTCATGATGAAAGGATCATTATCATCACAGGTCCAAATTATTCCGGGAAGAGTATATATATAAAGCAGGTTGCCTTAATTGTTTTCCTTTCTCACATCGGAAGTTTTGTACCGGCAGATGCTGCCACTGTGGGATTGACTGATAGGATATTCTGTGCGACTGGAAGCAAGCTTATGACTGCAGAACAATCAACATTTATGATAGATCTGCATCAAGTAGGACTGATGCTAAGGCAAGCAACTTCACGATCTTTGTGTCTGTTGGATGAATTTGGTAAAGGTACTTTAACTGAAGATGGCATTGGTCTACTTGGTGGAACTGTAAATTACTTTGTTGCATGTGATGACCCTCCAAAGGTTCTGTTGTCCACTCATTTGACTGAGTTATTTAATGATGGTTGCTTACCAAAGTCTGAGAAGGTGAATTTTTTCACCATGAGTTTGCTGAGACCTGACAACAACTCTACAGACATCAAGGACATTGTGTTTCTCTATCGGTTAGTTCCTGGACATGCACTTCTTAGCTATGGACTCCATTGTGCTCTGCTAGCTGGTGTCCCCGAGGAAGTTATTAAGAGAGCAGCATTCATATTGGATACCATCGGGAGCAGTAATTATGTTGAGCGATTGTGCAATGAGAATTTATCAGCTCAGGATCAACTAAACAAGGACACGGTTGACCGGATGCTGGAATTTGATGTTTTCAAGGGTGACATCAATCTCTTCTTCCACGGTATATTCCCTTGTTAA
Protein:  
MEEIDETEAQPQVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYTSTKSEESFLSALQRSGTLLFTCLTYELIYMWNVFKLQSDTDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLNIKERVSYLSSMMDIGSDVQVRASGGLLAILESERIVDTLEQKEYGNASITIDSVVEISLNKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPIGKLLLRNWFLRPLLDVENLNGRLDAKFDSPSSLSTVGDWTAFLKSVCALLHLGKIFEVGISENLQEHAKYLNLNIVEQACSCITTELAYVYELVIGVIDVNRSKEKGYGTIVKEGFCDELDELRQIYEELPDFLHKVTLLELAQLPHLGKEKLVPCIVYIHQIGYLLCIFEEKLEETSLLKPQDFEFMFSDVDGETKRYFYRTPKTRELDELLGDIYHKILDMERAITRDLVSHVLLFSDHLLKAINFAAELDCILSLAIVAHQNNYVRPILTEETLLDIQNGRHVLQEMTVDTFIPNDTKILHDERIIIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCATGSKLMTAEQSTFMIDLHQVGLMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTVNYFVACDDPPKVLLSTHLTELFNDGCLPKSEKVNFFTMSLLRPDNNSTDIKDIVFLYRLVPGHALLSYGLHCALLAGVPEEVIKRAAFILDTIGSSNYVERLCNENLSAQDQLNKDTVDRMLEFDVFKGDINLFFHGIFPC